PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0392s0018.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB_related
Protein Properties Length: 327aa    MW: 35629 Da    PI: 9.6466
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0392s0018.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.7e-1356100347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT eE+ +++++ k +G g W+ I+r +  +R + q+ s+ qky
  Bobra.0392s0018.1.p  56 AWTDEEHAQFLKGLKHYGRGKWREISRDFCPTRNATQVASHAQKY 100
                          7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
METQTGYCIL PVEGVLTEFQ LPPRIHLHKS AGVQKYTKQQ KSPGSPPANV PRKGVAWTDE  60
EHAQFLKGLK HYGRGKWREI SRDFCPTRNA TQVASHAQKY HIRLEKGTSG KRRSRFTDIE  120
EELSGEGEAA GPESSIARAQ GLLGVQGVRP FYSPTGAFGR TVGYPVGKVS TPAVPLPSHL  180
SHLPATRTSP TPGAVLLTVE PLDLTSSHRD SSRSPQSSGG MSPCDDCSVL RPTAEHNPFR  240
IDTLLRHGYI YPTTHSEQND IKLSDPSAFT PYSVRNTFNK FDFLLSAMQA AQTASSQRSG  300
LGHCTNFLDF KGVSSELFVK ANRAVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-22MYB family protein