PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0392s0021.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family HB-other
Protein Properties Length: 238aa    MW: 26660.5 Da    PI: 10.8494
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0392s0021.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.51.9e-07187236756
                          --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++e l +Le ++++++yps e  + L +  +L+ r+   WF  rR +++
  Bobra.0392s0021.1.p 187 LSAEVLATLEMVYQQSQYPSDEILKSLWDLHRLPRRRLVDWFAERRRRDR 236
                          68899******************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MNISMICKPI THGVQSTMAQ ICLGPCNLIR LKARGPRCQA LMVSLDAAHE GSSLANVRGK  60
DVQLKLHRAY IQGKRHINVQ NLCKEVGMER KAVLDWFKAF DALPESTREG ALASARRSLE  120
EEEQRKRMKE ERRAAFTFRP SGPRGEPGSS RPQAAGGRPG VPPQPSSSSS SSSFSPDWAR  180
TPANKKLSAE VLATLEMVYQ QSQYPSDEIL KSLWDLHRLP RRRLVDWFAE RRRRDRG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230235ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-06HB-other family protein