PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.106_2s0016.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 261aa    MW: 28537 Da    PI: 6.3425
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.106_2s0016.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000417394223
                          EETTTTEEESSHHHHHHHHHHT CS
               zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                          +C +C++sF++  +L  H  +H
  Bobra.106_2s0016.1.p 73 SCAICPESFKDVASLYEHTLSH 94
                          6*****************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MRLSQIKYYS KLADLLSYQS VTIVVSRTDV YARSSNVETT METCSGHVTQ FGRERKHNSI  60
GFPSNVDQGF FVSCAICPES FKDVASLYEH TLSHHNFPQA KPLKCALCRK RVPDYLQHLR  120
VHVKEQHAAG PSCASPVALD WGEIHLSRGP FQEEVFPAHA PRPVEAVDVL GASIGGMEEP  180
KPGRGNGEAD GTQSFRTVVQ TTAAEEASSG ASVTEPTVTS SSEEKMSPQT GPRPPMESDS  240
DALRERFVQQ LLIDAFCLDR *