PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.110_2s0037.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family bHLH
Protein Properties Length: 306aa    MW: 31793.8 Da    PI: 4.991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.110_2s0037.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.6e-11137182454
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                   HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            h ++E+rRR riN+++++Lr+++P++     ++ + a  Le ++eY++ L
  Bobra.110_2s0037.1.p 137 RHQAAEQRRRTRINERLDRLRDVVPHQ-----ERANTACFLETVIEYVNTL 182
                           599***********************9.....8**************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSRGSHVLKG AVPANFGIYF EANMPNGQGE DEEGPGEAMQ VAQVAMPVPA SAATPGMSGA  60
PTSQPAGLAA VLRNSAFMPV PPAAAQPFMP ELQLFSQFPQ LFSMHPLAAM AATQPENVGS  120
GRTRTGDSKS TSAYASRHQA AEQRRRTRIN ERLDRLRDVV PHQERANTAC FLETVIEYVN  180
TLKNKVAVLE AQLQAAGAQP ATELVTSSTV VQAPATEGLS YGDLPSSVPA AQPAESGMLP  240
HLTTTSLEQK VEIMPLGAPL EGVGPGSGSP ATPDGSFGHE AVLDAAFADS GEGDADGIPL  300
KKRRM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-12bHLH family protein