PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.150_1s0007.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 294aa    MW: 34136.3 Da    PI: 7.5952
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.150_1s0007.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000652849122
                          EEETTTTEEESSHHHHHHHHHH CS
               zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
                          + C+ C k F+ k +L +H+++
  Bobra.150_1s0007.1.p 28 FFCEFCLKYFRKKKTLIHHMSK 49
                          67******************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MIELGKFEID TWYWSPYPEP FASQEKLFFC EFCLKYFRKK KTLIHHMSKD ENHFPPGDEI  60
YRSPPLKDKA EHNPAIVDPP IAIFEVDGKK QKRYCQSLCL LSKLFLDHKT LYYDVDPFLF  120
YVLCEKDEDG YHIVGYFSKE KASAEGFNLA CILTLPPYQR KGYGRFLIAF SYELSRRDGK  180
VGTPERPLSD LGNVSYRSYW SRELLVAIYE HGPNISIKEL SELTAIRPDD IVSTLQFLGM  240
VRYWKGDHIL VVHPRTVEEH LKKGATQIPI AIEESRVHYT PYLTPSASLR PRP*