PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.174_1s0002.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 142aa    MW: 15272.4 Da    PI: 10.863
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.174_1s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.0006579102223
                           EETTTTEEESSHHHHHHHHHH..T CS
               zf-C2H2   2 kCpdCgksFsrksnLkrHirt..H 23 
                            C  C++ F +   L  H+r+  H
  Bobra.174_1s0002.1.p  79 YCVECSRYFGTAIALAEHQRSkpH 102
                           5*******************8666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MPKKGGIGKR GVGGNKKGSK AAKRAARRAF AVRHFDQVWE DIRREESVVT VDAEGRKGPV  60
GTTSKALLDD DIPGQGRIYC VECSRYFGTA IALAEHQRSK PHKRRVKALK GPRPHNQRDA  120
EAAAGMGPPD NGFSAPTPME V*