PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.27_2s0009.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

MYB_related

Protein Properties

Length: 537aa MW: 57861.6 Da PI: 4.6421

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.27_2s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.9	4.1e-12	370	418	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 grW + E +ll+++vk++G+g Wk+I ++ g ++R+ ++k++w+++ Bobra.27_2s0009.1.p 370 GRWAESETQLLINLVKEFGKGKWKRILEEGGsqfQNRSQVDLKDKWRNL 418 8**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAQMGPGSVM GFYQNAVHYC VLEYLLEQDE LTDQFIKMFC DYLNLSEASF PPIVQLRLMF 60 RVLGGSIATV TPATLQAVGC LKAVCVDPTR YPPTCDVMAA APSPDLLLQV KTELVVRALR 120 PGYEDGASAQ ELLDQYFPAD NSIGDVDRQR RNELQAAFGD EEKVALLQQT YLMSDVQGAI 180 TRFIADGRAK LGPPLIKLMD QQCRSGAYYP YMLQGPSPLY AFLAMQNRLP QGQPILNNST 240 ETSKKPPKQP PKRKRKSAGD GVAGATLVGL DELGKKLGGL GGADPLLGVL AQADQATQDQ 300 GSFSQAVAEA ASSMSLIRDT NEARPVVWSL TPQDMMPFDP SQLQLPGLGV QGGPLSPNSA 360 EKKVQRRKNG RWAESETQLL INLVKEFGKG KWKRILEEGG SQFQNRSQVD LKDKWRNLER 420 QKVVGPQDVG PQDQQTAAHE SDLQEAIADS TTAAMDVGPP ADALENLPGL ANDGLPVHPD 480 LDVSRVHMTD GAAPVEGIAT DLQPSEALHV APDCIPAHLV ASADELFAVP DSSGPQ*

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAQMGPGSVM GFYQNAVHYC VLEYLLEQDE LTDQFIKMFC DYLNLSEASF PPIVQLRLMF  60
RVLGGSIATV TPATLQAVGC LKAVCVDPTR YPPTCDVMAA APSPDLLLQV KTELVVRALR  120
PGYEDGASAQ ELLDQYFPAD NSIGDVDRQR RNELQAAFGD EEKVALLQQT YLMSDVQGAI  180
TRFIADGRAK LGPPLIKLMD QQCRSGAYYP YMLQGPSPLY AFLAMQNRLP QGQPILNNST  240
ETSKKPPKQP PKRKRKSAGD GVAGATLVGL DELGKKLGGL GGADPLLGVL AQADQATQDQ  300
GSFSQAVAEA ASSMSLIRDT NEARPVVWSL TPQDMMPFDP SQLQLPGLGV QGGPLSPNSA  360
EKKVQRRKNG RWAESETQLL INLVKEFGKG KWKRILEEGG SQFQNRSQVD LKDKWRNLER  420
QKVVGPQDVG PQDQQTAAHE SDLQEAIADS TTAAMDVGPP ADALENLPGL ANDGLPVHPD  480
LDVSRVHMTD GAAPVEGIAT DLQPSEALHV APDCIPAHLV ASADELFAVP DSSGPQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	257	PKRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	1e-08	MYB_related family protein