PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.341_2s0033.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB_related
Protein Properties Length: 243aa    MW: 26469.2 Da    PI: 9.9861
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.341_2s0033.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.8e-13123167347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           +WT+eE+ l++ +  ++G+g+W++I+r   ++Rt+ q+ s+ qky
  Bobra.341_2s0033.1.p 123 PWTEEEHRLFLLGLGKFGKGDWRSISRNYVTTRTPTQVASHAQKY 167
                           7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MANTSVSGGS GGGGKKGNFH PVKAEPGSVW TPEEEKTFEL VFLENIDAPQ QDRLHKVAAR  60
LPGKTLADIE KYIEDLEADF KALDTGSIPL PPYRHSANEP SIPLTVQKPA VKAADQERRK  120
GIPWTEEEHR LFLLGLGKFG KGDWRSISRN YVTTRTPTQV ASHAQKYFIR LNSQTKKDKR  180
RSSIHDITTP TTDMTSPVMG MAQHPGMAQG VPMSGLPLVP GMVQPGVPTA IPMPPQPRPP  240
PQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-45MYB family protein