PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.341_2s0033.2.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB_related
Protein Properties Length: 221aa    MW: 24265.4 Da    PI: 9.8278
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.341_2s0033.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.6e-13123167347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           +WT+eE+ l++ +  ++G+g+W++I+r   ++Rt+ q+ s+ qky
  Bobra.341_2s0033.2.p 123 PWTEEEHRLFLLGLGKFGKGDWRSISRNYVTTRTPTQVASHAQKY 167
                           7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MANTSVSGGS GGGGKKGNFH PVKAEPGSVW TPEEEKTFEL VFLENIDAPQ QDRLHKVAAR  60
LPGKTLADIE KYIEDLEADF KALDTGSIPL PPYRHSANEP SIPLTVQKPA VKAADQERRK  120
GIPWTEEEHR LFLLGLGKFG KGDWRSISRN YVTTRTPTQV ASHAQKYFIR LNSQTKKDKR  180
RSSIHDITTP TTDMTSPVMG DNRPPPPLLS VLSVLSNPSS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-44MYB family protein