PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.354_1s0003.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C3H
Protein Properties Length: 153aa    MW: 17933.4 Da    PI: 7.3364
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.354_1s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.62.2e-08829425
                          ---SGGGGTS--TTTTT-SS-S CS
               zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                          + Cr+f+++  Ck G+rC+F H
  Bobra.354_1s0003.1.p  8 RVCRYFQQGQVCKEGNRCRFLH 29
                          78******99************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MMGQRQPRVC RYFQQGQVCK EGNRCRFLHE IPGGKSDFQC FASYRDRVWS QQEASSSTHG  60
FRIMSYNCLA DDLVYTHAKE LYPAVPRFCL KWSYRLELLL NEIEFLQPDI LCLQEIDHTM  120
DFENFLRPRG YEGDYASRTA WCVSRPCGFP PH*