PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.97_1s0011.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family GATA
Protein Properties Length: 226aa    MW: 24580.7 Da    PI: 9.8292
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.97_1s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA343.9e-111544130
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30
                         C++Cg + T +WR+gp  +++LCnaCG ++
  Bobra.97_1s0011.1.p 15 CHHCGESLTCCWRKGPAEKPHLCNACGSRW 44
                         ****************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGPLRPVVPH AAGPCHHCGE SLTCCWRKGP AEKPHLCNAC GSRWLAKKDL KGYYPGKRVT  60
GKPSYQEDVS NGGSYYTHDD TEADFFNMKV PTKKRKKLSG SPVSSYQYAQ NSDPRFVEPR  120
STFKRSIGTQ TDPIKTQVII IRDPSGAGVI PHPPSILERL PSGMGSLSRT TSFNKDGTGI  180
PSSYLSRTSM DGNFVPSRPC PALFKGREAL QSGADTTSTD TTERR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19397KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.12e-13GATA family protein