PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000001.1_g140.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 215aa    MW: 24106.2 Da    PI: 6.6463
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000001.1_g140.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB173.13e-5450144195
                  NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 
                            vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl+
  Cse_sc000001.1_g140.1  50 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFVTGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLH 137
                            69************************************************************************************** PP

                  NF-YB  89 kyreleg 95 
                            +yre++g
  Cse_sc000001.1_g140.1 138 RYREFDG 144
                            ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MERGGGFHGY HRLPTHPTSG GTQQPDMKMK LPEMTSTTVP TPTEDNECTV REQDRFMPIA  60
NVIRIMRKIL PPHAKISDDA KETIQECVSE YISFVTGEAN DRCQREQRKT ITAEDVLWAM  120
SKLGFDDYIE PLTVYLHRYR EFDGGERGSI RGEPLVKRTA DHGHFGMSHP FVPAFHMGHH  180
HNGFFGPASI GGFMKDPSSA GPSGPGFEPY AQCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.19e-71NF-YB family protein