PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000018.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 177aa    MW: 19243.6 Da    PI: 10.4637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000018.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19120169255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+ +++g
  Cse_sc000018.1_g020.1 120 NYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDRAAIEFRG 169
                            59*******.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MDNRLTNKFN QQASTSFHHQ QPQPPPWRRL TTDEEVAVMV ATLRNVISGS TDSLSIFQVP  60
NPQTCRVCGI SGCLGCNFFT HDNNHSNVGA GAGAGVAVQT EAGVGAEAGA GGPIRKKKKN  120
YRGVRQRPWG KWAAEIRDPH KAARVWLGTF ETAEAAARAY DRAAIEFRGA RAKLNFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.18e-31ERF family protein