PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000044.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 291aa    MW: 32906.1 Da    PI: 8.4726
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000044.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.67.5e-34501901128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                            lp+G++F+Ptd+e++ e+Lk+kv  +       ++++  +i+   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++ 
  Cse_sc000044.1_g080.1  50 LPAGVKFDPTDQEIL-EHLKAKVGCDAeelhplIDEFIpTIEGEtGICYTHPEKLP-GVSNDGQIRHFFHRPSKAYTTGTRKRRKVHm 135
                            799***********9.99****998885665443332333554448**********.566667778******************8444 PP

                    NAM  80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                 + +W++tgk+++vl  +g++ g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  Cse_sc000044.1_g080.1 136 daergETRWHKTGKTRPVLM-SGSVQGYKKILVLYtnYGRQKKPEKTNWVMHQYHL 190
                            45544778************.9999**********6658***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MTWCNDENDT LRTLSTSSRN LKNSITSSCP SCGHDIQLQA KGLIHDLPGL PAGVKFDPTD  60
QEILEHLKAK VGCDAEELHP LIDEFIPTIE GETGICYTHP EKLPGVSNDG QIRHFFHRPS  120
KAYTTGTRKR RKVHMDAERG ETRWHKTGKT RPVLMSGSVQ GYKKILVLYT NYGRQKKPEK  180
TNWVMHQYHL GNNEEEKDGE IVLSKVFYQT QPRNCASGLK ESSSLAEKNE RNPKTRNLGY  240
TQNYSVDCPF VSFDIDRRQV NKEISSHVIP GFSLQDDPLS LIHLSTGASK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-117NAC family protein