PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000073.1_g140.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 233aa    MW: 26901.2 Da    PI: 5.0269
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000073.1_g140.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.53.8e-0775120147
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                            ++Y++YA+  GF+++ks ++ + ++g + ++  +C+keg +++ + +
  Cse_sc000073.1_g140.1  75 EMYSTYAEAGGFQIKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINID 120
                            58***************99888.778899**********99876666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVEMISENYK QGHDCNFTYK DVICYKSDVI FYEITCDFCE HAETPGGSIY WEPHVEGICV  60
PEEGKYYDTI EEAIEMYSTY AEAGGFQIKK SGQRLTKSGM VQHKYIMCNK EGIPRRINID  120
TLDPQNTATN KIGATRAHNF LTSLKGVYEY VHGTSDDFKN HQRDINAFIG ESDAEMLINK  180
MENRKMYVPN FTFQYKVQNS ELVAMFWADE VAKCNYKEFG DIVSFDATFR SNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-09FAR1 family protein