PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000076.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 239aa    MW: 27012.5 Da    PI: 8.45
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000076.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-2089139256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                            +++G+r+++ +g+W+AeIrdp     +  r++lg+f t+eeAa+a+++a+k+++g+
  Cse_sc000076.1_g020.1  89 KFRGIRQRP-WGKWAAEIRDPQ----KgIRVWLGTFSTPEEAAQAYDEAAKRIRGN 139
                            89*******.**********94....34*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MCGGAIISDA EPVFNHDRKL NADDLWSDFD TYDLFGWDFK PQSQRSTTKV ATKNTCSKTS  60
KPKKIINKDP IDEKPRKASE KKAKPRKNKF RGIRQRPWGK WAAEIRDPQK GIRVWLGTFS  120
TPEEAAQAYD EAAKRIRGNK AKLNFLSPAP PAKKLCVESP IESTHSTVHE PLSPPALMDF  180
DQLQNTSYYP NNVPDEYEFK EQISSLETFL GLDHDSTQFG GINGASSPLW MMGDFMDIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-52ERF family protein