PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000077.1_g130.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 326aa    MW: 36684 Da    PI: 5.9133
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000077.1_g130.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.65.9e-181966148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd++l+d+++ +G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc000077.1_g130.1 19 KGAWTPEEDQILIDYIQAHGHGSWRALPKLAGLQRCGKSCRLRWTNYL 66
                           79********************************************97 PP
2Myb_DNA-binding53.94.1e-1772117148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg +++eE++++++++  lG++ W+tIa +++ gRt++++k++w++++
  Cse_sc000077.1_g130.1  72 RGEFSKEEEDIILHLHSVLGNK-WSTIATRLP-GRTDNEIKNYWNTHM 117
                            899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGRCPTSTSR DDENNILKKG AWTPEEDQIL IDYIQAHGHG SWRALPKLAG LQRCGKSCRL  60
RWTNYLRPDI KRGEFSKEEE DIILHLHSVL GNKWSTIATR LPGRTDNEIK NYWNTHMKKK  120
LLHMGIDPMT HQPRTDVYSC LPQLLALANI KELLEHNQLA QNLQYFNLLL QNNTGLSTLS  180
NRTNSLPQMQ EETPSFANNF QLALNQESEE MTQFLGLNSS VTQPLHEVTI MNLQTTNDHE  240
VVGHEHGKAR LTSVNSSSSL SSSVTNWTSM LQLIDSTTPT ITLTINSDSL ESGSAISYGG  300
GEGDGGAPSY NWPEYLFEDS FLDRNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.12e-85MYB family protein