PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000080.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 223aa    MW: 25102.6 Da    PI: 9.4622
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000080.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.71.2e-144295155
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                    HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                           ++ +hn+ Er RR+r+N+ ++ Lr+llP +s  ++kK +s  +++  Av+YI +Lq
  Cse_sc000080.1_g040.1 42 KKLNHNAGERDRRKRVNDLYSYLRSLLPIPS--YHKKkVSIPDTVSSAVKYIPELQ 95
                           6789*************************62..55555***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
TKFHTFDIYT YNQTMQHFEQ ENSTSSGIAA NGSTGDDTMG AKKLNHNAGE RDRRKRVNDL  60
YSYLRSLLPI PSYHKKKVSI PDTVSSAVKY IPELQTEVET LKRKKEKVQW SSSPTMNAKQ  120
EHLAIKKKSC KTKTNSFLVS SVNVLGDKEV VIQLISSTDH TSTNKEIGFL SKVLENLEHD  180
EKGFVVLNAT TMKCSGEGMV LNTLHLQVYL SIFVPITISF ELL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102128KRKKEKVQWSSSPTMNAKQEHLAIKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-32bHLH family protein