PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000098.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 228aa    MW: 26954.6 Da    PI: 8.8237
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000098.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-181057148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd ll++ v+++G g+W+++a+  g++R +k+c++rw +yl
  Cse_sc000098.1_g040.1 10 KGPWTAEEDRLLIEHVQLHGEGRWNSVASLAGLKRNAKSCRLRWVNYL 57
                           79********************************************97 PP
2Myb_DNA-binding52.98.7e-1763107147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rgr T+ E+++++++++++G++ W+tIar ++ gRt++++k++w+++
  Cse_sc000098.1_g040.1  63 RGRITPLEEKIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 107
                            899*******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEEQLGFWRK GPWTAEEDRL LIEHVQLHGE GRWNSVASLA GLKRNAKSCR LRWVNYLRPD  60
LKRGRITPLE EKIILELHAR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKN KGKNNIHDST  120
KLQARLLKRQ KFHQEQQRQL QLQKNEEDMK KVLSILDESD NKVVHEDTQS VLYPIMFNDS  180
HYMVETSMND QDFVNLWDGL WNLEDVHDVT TKGCGPCGQN LAMSMPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.19e-72MYB family protein