PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000119.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

AP2

Protein Properties

Length: 638aa MW: 69714.3 Da PI: 6.231

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000119.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.2	1.3e-10	253	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g +rk + g ++ +++Aa+a++ a++k++g Cse_sc000119.1_g050.1 253 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqVRKGRQ-GGYDKEDKAARAYDLAALKYWG 309 57*****************55554447777777.6699999***********98 PP
2	AP2	51	3.7e-16	352	403	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g Cse_sc000119.1_g050.1 352 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 403 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MAASMNNWLG FSLSPQDQQQ IVDSQTSIVD NFNSDNISGT GECFDLSGTD VHSGIPSLNL 60 PPPYGMLEPY HNHHDWNMKA SSDLSVLMAG GGSCNGENPE IQPPKFENFL SVGNGGDYMY 120 STMQLPPQGQ ATQATTTTAT TASSNIGLSM IKNWLRNNPT TPSNQNPTRP PENQETDERT 180 AAMGGFSSGR TNELSLSMGT GGGGGGGGGD SSSSDNKRQQ MEVATTVDSE NTGGATTEAV 240 PRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QVRKGRQGGY DKEDKAARAY 300 DLAALKYWGT TTTTNFPIAN YEKEIDEMKN MTRQEYVASL RRKSSGFSRG ASIYRGVTRH 360 HQHGRWQARI GRVAGNKDLY LGTFGTQEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKCI 420 LESTTLPIGG AAKRLKDAEQ AAATELLRAA KEDHLNSQLT HEGINNYTTM TWPSSIDYHH 480 QAMAQAQAQP FSMHYPQHYN VSNQQRLWCK QEQTEPDGQS FQDLQQIHQF FQPSPNSSVL 540 HNLMNLDSSS TEHSYSGGGG GDHQVVGYGN ASSGYMNHMM ANGTINDSAQ DGDGNMYYHQ 600 GSGYGGWVPT AIPTLAARTA NMVVTNGGAP TFTVWNDS

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MAASMNNWLG FSLSPQDQQQ IVDSQTSIVD NFNSDNISGT GECFDLSGTD VHSGIPSLNL  60
PPPYGMLEPY HNHHDWNMKA SSDLSVLMAG GGSCNGENPE IQPPKFENFL SVGNGGDYMY  120
STMQLPPQGQ ATQATTTTAT TASSNIGLSM IKNWLRNNPT TPSNQNPTRP PENQETDERT  180
AAMGGFSSGR TNELSLSMGT GGGGGGGGGD SSSSDNKRQQ MEVATTVDSE NTGGATTEAV  240
PRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QVRKGRQGGY DKEDKAARAY  300
DLAALKYWGT TTTTNFPIAN YEKEIDEMKN MTRQEYVASL RRKSSGFSRG ASIYRGVTRH  360
HQHGRWQARI GRVAGNKDLY LGTFGTQEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKCI  420
LESTTLPIGG AAKRLKDAEQ AAATELLRAA KEDHLNSQLT HEGINNYTTM TWPSSIDYHH  480
QAMAQAQAQP FSMHYPQHYN VSNQQRLWCK QEQTEPDGQS FQDLQQIHQF FQPSPNSSVL  540
HNLMNLDSSS TEHSYSGGGG GDHQVVGYGN ASSGYMNHMM ANGTINDSAQ DGDGNMYYHQ  600
GSGYGGWVPT AIPTLAARTA NMVVTNGGAP TFTVWNDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-125	AP2 family protein