PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000120.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 353aa MW: 40896.7 Da PI: 5.0205

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000120.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.6	2.9e-54	12	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL k ++e++ewyfFs +dkky+tg+r+nrat +g+Wka Cse_sc000120.1_g090.1 12 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLIeKcwIGYEEQNEWYFFSYKDKKYPTGTRTNRATMAGFWKA 98 69**************************.9***********733543344677************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk+v++ k +l+g++ktLvfykgrap+g+ktdW+mheyrle Cse_sc000120.1_g090.1 99 TGRDKAVYE-KLRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 141 *****.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MIMDTVDQSS CVPPGFRFHP TDEELVGYYL RKKVASQKID LDVIRDIDLY RIEPWDLIEK 60 CWIGYEEQNE WYFFSYKDKK YPTGTRTNRA TMAGFWKATG RDKAVYEKLR LIGMRKTLVF 120 YKGRAPNGQK TDWIMHEYRL ESDENGPPQE EGWVVCRAFK KRATGQTRTT ERWESKYINI 180 ESNHITSARD DYITTPSSSF LATQSFMCKQ ELEGADNLSF VNVDPFIQLP QLESPSLLSK 240 KRSISSIYEH DQEYSKNKGR ITNESDTNVT NVDEVRDWRA LDKFVASQLS HEEEIQCMGE 300 GFSSSFEENH NSDLSFMLMQ RGREEGCSNE GKLSGFLGST SSDHFDIGLC IFD

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MIMDTVDQSS CVPPGFRFHP TDEELVGYYL RKKVASQKID LDVIRDIDLY RIEPWDLIEK  60
CWIGYEEQNE WYFFSYKDKK YPTGTRTNRA TMAGFWKATG RDKAVYEKLR LIGMRKTLVF  120
YKGRAPNGQK TDWIMHEYRL ESDENGPPQE EGWVVCRAFK KRATGQTRTT ERWESKYINI  180
ESNHITSARD DYITTPSSSF LATQSFMCKQ ELEGADNLSF VNVDPFIQLP QLESPSLLSK  240
KRSISSIYEH DQEYSKNKGR ITNESDTNVT NVDEVRDWRA LDKFVASQLS HEEEIQCMGE  300
GFSSSFEENH NSDLSFMLMQ RGREEGCSNE GKLSGFLGST SSDHFDIGLC IFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-128	NAC family protein