PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000123.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Trihelix
Protein Properties Length: 177aa    MW: 20246.8 Da    PI: 4.6096
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000123.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix65.31.3e-2054114262
               trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkryk 62 
                            W+++e+++Li +r e+e ++  +k++k+lWe v++km+e g+ rs  qCk+kw+nl +ryk
  Cse_sc000123.1_g110.1  54 WSERETRDLIVIRGELEGDFVVSKRNKGLWEVVGSKMKELGYARSGDQCKCKWKNLVTRYK 114
                            ************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MFNTNTGSDM NPNNNETLAH LTQMMMMNIP QEQQPGIISG GVGEVEEYGR VAAWSERETR  60
DLIVIRGELE GDFVVSKRNK GLWEVVGSKM KELGYARSGD QCKCKWKNLV TRYKVYDLDF  120
DYEALNDNEM LMLLEAIGDY HDSTRFYHMV LENFGIPEGH DVFVTKLKDS LHSENAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.14e-21Trihelix family protein