PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000131.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 416aa MW: 45255.7 Da PI: 9.3903

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000131.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.2	3.2e-06	183	205	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cgk F ++nL+ H + H Cse_sc000131.1_g080.1 183 TCHKCGKQFGKWENLEAHHLSkH 205 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MPTVWFSLKK SLHCKSDPRE VHEPKTKPHL GAILTRKPAR SGCSRSIANL KDVINGGSKR 60 HEKPVDCSPR SIGSNEFVNP ITHEVILSDS RCELKITGFN GGFSDISNGG NGDVTLHSVK 120 THQQTSTTTS TTRRTLSLSS AKALDRNGIA NGGGVTGKNG STQKPKVTSE TESYGSSVGG 180 AVTCHKCGKQ FGKWENLEAH HLSKHAVTEL MEGDSSRKIV EIICRSSLVK AENNSGRIEK 240 VLKVHNMQKT LARFEEYREL VKTNASKLPK KHSRCLADGN ELLRFYGTTI ACSLGINGET 300 SLCISDKCCV CRIIRQGFST GKELKGGVGV FTTSTSARAF ESIEVFDDSL DTRKALMVCR 360 VIAGRVHRPL ENIQEITEQT GFDSLAGKVG LHSNIEDLYL LSPKALLPCF VVICKL

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MPTVWFSLKK SLHCKSDPRE VHEPKTKPHL GAILTRKPAR SGCSRSIANL KDVINGGSKR  60
HEKPVDCSPR SIGSNEFVNP ITHEVILSDS RCELKITGFN GGFSDISNGG NGDVTLHSVK  120
THQQTSTTTS TTRRTLSLSS AKALDRNGIA NGGGVTGKNG STQKPKVTSE TESYGSSVGG  180
AVTCHKCGKQ FGKWENLEAH HLSKHAVTEL MEGDSSRKIV EIICRSSLVK AENNSGRIEK  240
VLKVHNMQKT LARFEEYREL VKTNASKLPK KHSRCLADGN ELLRFYGTTI ACSLGINGET  300
SLCISDKCCV CRIIRQGFST GKELKGGVGV FTTSTSARAF ESIEVFDDSL DTRKALMVCR  360
VIAGRVHRPL ENIQEITEQT GFDSLAGKVG LHSNIEDLYL LSPKALLPCF VVICKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-159	C2H2 family protein