PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000133.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 207aa    MW: 23756.1 Da    PI: 5.0697
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000133.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-191867255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr+++ +gr++AeIrdp +   + r +lg+f+taeeAa a++ a+++++g
  Cse_sc000133.1_g080.1 18 KYRGVRRRP-WGRYAAEIRDPQT---KERRWLGTFDTAEEAACAYDSAARAMRG 67
                           8********.**********943...4999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDNAFQKRYK QTTTTTVKYR GVRRRPWGRY AAEIRDPQTK ERRWLGTFDT AEEAACAYDS  60
AARAMRGSKA KTNFVYPPLL YNSQHNFHAP QTQNYNPSLD KYFQHGSTSS YANSNNDLTT  120
CTTAVTSTEI SQDDYSEFFP MEANDSGLLD QVLTGFYPKP DKASKPELDS TLMNTIEYNY  180
DDQMYGFGNE ECVFGDIMHY PENFGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-28ERF family protein