PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000147.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 582aa MW: 65709.5 Da PI: 9.6131

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000147.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.4e-08	461	508	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W+ E ++l+d+v+ +G g W+ I + + +Rt ++k++w+++l Cse_sc000147.1_g110.1 461 WSVSEVKKLIDGVAHFGVGKWTHIKKLLFassVHRTSVDLKDKWRNLL 508 **********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MNQVEDESIY HSLEEEAIDV GCLLMEPRCD QLSVNNVWSY EENNTGKCIR TEDASYNLDS 60 NIRTGYVKGT KLNALDVLPH KAGMENLLSA SGVSPCDEYL LGYVDPGGCI DYVSNDGLHV 120 GNFCSQSQFP MNGSFEIRNS LTESLSGSEC QNYFLNNCNF GLSTKSSESK IVDRFEDFSK 180 SFIDQENNED IQFEQNETEI TPFCQDVPIS SAQDHGVDAP ANKRSRKPTK RYIDESSLLT 240 LKNCKKRKEA SSVSKVKNKA SRVGRPKLQK DMEPKEDLSS YEVSFGTAIQ VPFISQGPTE 300 CEKNISPRQK NNSPRQNNNL PPQKNNSPRQ NNPPREKNNP PREKNNSPPQ KNNSQPEKNS 360 SPPQKNNLPR QKNNLPPQKN SSPQKNNSAP QKNNLPRQKN NLPPQKNSSP QKNNSAPQKK 420 NSPLPIEKHF KYYTSESEED DSETLMRSVA SGNQRKHHKL WSVSEVKKLI DGVAHFGVGK 480 WTHIKKLLFA SSVHRTSVDL KDKWRNLLKA SQALKGDRIQ DLHKRNQPWR PLPKPILCRV 540 IELASAYPYP RENHSKTSKS KFPLAHHVSS PARIKSNKVP VL

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MNQVEDESIY HSLEEEAIDV GCLLMEPRCD QLSVNNVWSY EENNTGKCIR TEDASYNLDS  60
NIRTGYVKGT KLNALDVLPH KAGMENLLSA SGVSPCDEYL LGYVDPGGCI DYVSNDGLHV  120
GNFCSQSQFP MNGSFEIRNS LTESLSGSEC QNYFLNNCNF GLSTKSSESK IVDRFEDFSK  180
SFIDQENNED IQFEQNETEI TPFCQDVPIS SAQDHGVDAP ANKRSRKPTK RYIDESSLLT  240
LKNCKKRKEA SSVSKVKNKA SRVGRPKLQK DMEPKEDLSS YEVSFGTAIQ VPFISQGPTE  300
CEKNISPRQK NNSPRQNNNL PPQKNNSPRQ NNPPREKNNP PREKNNSPPQ KNNSQPEKNS  360
SPPQKNNLPR QKNNLPPQKN SSPQKNNSAP QKNNLPRQKN NLPPQKNSSP QKNNSAPQKK  420
NSPLPIEKHF KYYTSESEED DSETLMRSVA SGNQRKHHKL WSVSEVKKLI DGVAHFGVGK  480
WTHIKKLLFA SSVHRTSVDL KDKWRNLLKA SQALKGDRIQ DLHKRNQPWR PLPKPILCRV  540
IELASAYPYP RENHSKTSKS KFPLAHHVSS PARIKSNKVP VL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	3e-22	MYB_related family protein