PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000151.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 219aa    MW: 25942.9 Da    PI: 9.3722
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000151.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-18449147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           rg W + Ed++l ++v+q+G+++W++Ia++++ gR++k+c++rw++ 
  Cse_sc000151.1_g040.1  4 RGHWRPSEDQKLRQLVQQYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49
                           899*****************************.***********996 PP
2Myb_DNA-binding58.12.1e-185699146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           r ++T+eE+e+l+ +++++G++ W+ Ia+ ++ gRt++ +k++w+ 
  Cse_sc000151.1_g040.1 56 RSPFTEEEEERLLAYHREFGNR-WANIAKLFP-GRTDNAVKNHWHV 99
                           789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MCSRGHWRPS EDQKLRQLVQ QYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPKINRSPFT  60
EEEEERLLAY HREFGNRWAN IAKLFPGRTD NAVKNHWHVI MARKVRERST RMHKRTNVGL  120
DHAFAQRYQY ANFPYELSRN LASHLQLTKN LVNQFKINED KRDRSVEFYN FLPVNTDSNG  180
SEVIDHQRKD EVEVEQEATE EQQGSTNTTV PFIDFLSVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-80MYB family protein