PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000167.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 333aa    MW: 36669.6 Da    PI: 7.2042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000167.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1861111155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            s+y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Cse_sc000167.1_g050.1  61 SRYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 111
                            79********.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEEAMRRLAG FTPSSEPDLF SLPPPQPQTT QKRTNTTTTT THSAANKRLA LKDNNSSNNT  60
SRYRGVRRRP WGRYAAEIRD PQSKERRWLG TFDTAEEAAC AYDCAARAMR GSKARTNFVY  120
PSSPCDINHP FSFVNNKSQP LIGSLPPYEN MQKNHGSCLN SFLFHDYFSP GSSSCNPNST  180
GSVSTALGSV TKNCSTPLVR QEAEFKEFFP SEPDHSGLLD DVLSGFYPKP EAKAKPGSEL  240
FEPVQEVKKS VEANPFGFFF ENQNGFSGNN QMSHFEFVQS LNGGGGGFNG GGLPFYNGHV  300
VAPVGYENQE SMFADVFQHP EVVGLFAARL QNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.18e-19ERF family protein