PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000174.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 238aa    MW: 26819.8 Da    PI: 7.7252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000174.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000335098153
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                           +r  + erE+  R+++N+ f eL   l  +     +   Ka+iL ++++ +k+
  Cse_sc000174.1_g070.1 50 KRIHKAEREKLKREHLNELFLELAGALELS----EQNSGKASILGETTRVVKD 98
                           688899*********************997....4566678888888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MHASLKQLPA TLLFTTLLLV TTRLPLLSQL LSPREASLQP SKKSPGKIPK RIHKAEREKL  60
KREHLNELFL ELAGALELSE QNSGKASILG ETTRVVKDMV DQIKSLRKEN AALLSESQYV  120
TIERNELQDE ASTLQNQISV LRSMIKERTV QINLDLNAPA IETHEPQYFP QDIIRLPSGD  180
PVLNPVFVIP TCQNVQINPQ TVSNVSKPNP RYPTASDSWP FQLLEKPSQE VGEIQHRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.25e-39bHLH family protein