PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000185.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 289aa    MW: 32774 Da    PI: 8.7588
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000185.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  Cse_sc000185.1_g010.1 14 KGPWTPEEDIILVTYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61
                           79******************************99************97 PP
2Myb_DNA-binding44.92.6e-1467112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++T  E+  +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Cse_sc000185.1_g010.1  67 RGNFTSHEEGMIVHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112
                            89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVTYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TSHEEGMIVH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKINKLQ  120
SAFDSQMTVP SDSTKYPPLL VSKVPSEKSH QNVTSTKNPH HHTNIYASST QNISRLLDGW  180
MRSSSSSTSP KKLADQVPGK ECLNSLVESV DFEFESVLSF DNGCWDKMMS GDYYQKGGYA  240
NDEKASHILH ERKLQKQHSL NNPPMTFLER WLLDESASQL DGAIEQQVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-101MYB family protein