PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000193.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 236aa    MW: 27476.9 Da    PI: 8.6962
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000193.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.78.6e-31151421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 
                            l pG+rF Pt+ el+v+yLk+k+++ k + +    ev+iy++ P +L +  ++++ e++wyf ++r++k+++gkr+nr+tk  g+Wka
  Cse_sc000193.1_g010.1  15 LEPGYRFCPTNVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELTAkpEYRSCENKWYFLTPRQRKHPNGKRPNRKTKsGGTWKA 102
                            579*********************9997774569*************84356777889********************8874689*** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +   k+  +  +++vg k+ L +    ++kg+kt W+mhey+ 
  Cse_sc000193.1_g010.1 103 SQMGKPQRDDMNRVVGSKTCLFYI---DEKGNKTAWLMHEYTT 142
                            *******99999999999999888...78899*********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MAYNNQEQHD YADSLEPGYR FCPTNVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE  60
LTAKPEYRSC ENKWYFLTPR QRKHPNGKRP NRKTKSGGTW KASQMGKPQR DDMNRVVGSK  120
TCLFYIDEKG NKTAWLMHEY TTDNPNIPLG SQEQIEDNNM LTRWVLCKIY KKGTKPANNN  180
VGNQEEAFEE QYQQLQDEPS EVARMKKVPY ASAVGSIMYA VRCTRPDVAF AQNLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-31NAC family protein