PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000193.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 475aa MW: 54192.8 Da PI: 4.7065

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000193.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.2	2.1e-29	15	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknrat 78 l pG+rF Pt+ el+v+yLk+k+++ k + + ev+iy++ P +L ++++ e++wyf ++r++k+++gkr+nr+t Cse_sc000193.1_g080.1 15 LEPGYRFCPTNVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELTGnlffdttakpEYRSCENKWYFLTPRQRKHPNGKRPNRKT 102 579*******************9997774569*********8448999888776667889****************88 PP NAM 79 k.sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k g+Wka+ + k+ + +++vg k+ L + ++kg+kt W+mhey+ Cse_sc000193.1_g080.1 103 KsGGTWKASQTGKPQRDDMNRVVGSKTCLFYI---DEKGNKTAWLMHEYTT 150 74689999999999899999999999888...78899********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MAYNNQEQHD YADSLEPGYR FCPTNVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE 60 LTGNLFFDTT AKPEYRSCEN KWYFLTPRQR KHPNGKRPNR KTKSGGTWKA SQTGKPQRDD 120 MNRVVGSKTC LFYIDEKGNK TAWLMHEYTT DNPNIPLGSQ EQIEDNNMLT RWVLCKIYKK 180 ETKPANNNVG NQEEAFEEQY QQLQDEPSPR RRRLSLNQES NQSNGPEHVP VQETNYHLET 240 DVQMAESVQF MLTSNQQSDL NIVHGGASQT FPTTSMNTSP NPVTVQPMAM FCGSKLTQPA 300 VQDPPQAFAM DQVQQSVGNS TLVYYQNQSR PTSTNGFQLS CGASSSSSKV SPPAILEPGD 360 NDMTPVPHEE DIYDNLAPLD DFIISPSHAL AFQMDTNSNP MTMQQMGSSQ TLSNEVLQQH 420 VQNSYDDTQS FCDQSMIVHK NDYSYLDKLI NEDALNYHPS EYHSFDCLDE SIIFE

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MAYNNQEQHD YADSLEPGYR FCPTNVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE  60
LTGNLFFDTT AKPEYRSCEN KWYFLTPRQR KHPNGKRPNR KTKSGGTWKA SQTGKPQRDD  120
MNRVVGSKTC LFYIDEKGNK TAWLMHEYTT DNPNIPLGSQ EQIEDNNMLT RWVLCKIYKK  180
ETKPANNNVG NQEEAFEEQY QQLQDEPSPR RRRLSLNQES NQSNGPEHVP VQETNYHLET  240
DVQMAESVQF MLTSNQQSDL NIVHGGASQT FPTTSMNTSP NPVTVQPMAM FCGSKLTQPA  300
VQDPPQAFAM DQVQQSVGNS TLVYYQNQSR PTSTNGFQLS CGASSSSSKV SPPAILEPGD  360
NDMTPVPHEE DIYDNLAPLD DFIISPSHAL AFQMDTNSNP MTMQQMGSSQ TLSNEVLQQH  420
VQNSYDDTQS FCDQSMIVHK NDYSYLDKLI NEDALNYHPS EYHSFDCLDE SIIFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	5e-29	NAC family protein