PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000205.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 277aa    MW: 31603 Da    PI: 6.1071
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000205.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.92.9e-07131169342
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42 
                            Y +YA++vG+ v+ks++++  rng +++r +vC++eg ++
  Cse_sc000205.1_g020.1 131 YMKYASKVGYMVKKSSQTRL-RNGIVKQRYLVCNREGCPK 169
                            99************999998.8999************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDSISTTFED IVATDSVSNF VSTTSEDIVA TDMSPTSAEI VVTDLSTTSK EIVVRDDVSA  60
KFTKEIVAYE HCVESEAIKK PSDLKTPESF FTHSNFDTLS GTVYYILKVP VDVLLYKGNV  120
YNSVDECISA YMKYASKVGY MVKKSSQTRL RNGIVKQRYL VCNREGCPKG IHYKLTVVDS  180
IHNHELEPEE CKHLSKTERQ LTYDEQVFIV KAASDGSVRK AIEEEFVGSK HRLCMWHITQ  240
KLLGKICLKI YDYTDFKKKF NQIVWNMYIG PDEFEEK