PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000217.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 328aa    MW: 37536 Da    PI: 7.5182
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000217.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.2e-161462148
                           TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W++eEd +l++ ++++G+g +W + +++ g++R++k+c++rw++yl
  Cse_sc000217.1_g010.1 14 KGPWSPEEDAKLKEFIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                           79*********************************************97 PP
2Myb_DNA-binding361.7e-1169111246
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            g ++ +Ed  +  + +  G++ W+ Ia+ ++ gRt++++k++w++
  Cse_sc000217.1_g010.1  69 GEFSDDEDRVICSLYASIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111
                            789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGRAPCCDKA SVKKGPWSPE EDAKLKEFIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIRHGE FSDDEDRVIC SLYASIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLTM  120
LPSLQETQSF FPSLPFQTPP QLQPSYDHHT SHQFMNTSSS SFYNFSNPSF MNVDNTSNSF  180
FAPNDHRNNV PNFSPPQANN LISNKNINDV NDNCFNNSYL GFQDDQHNMC NSPMLMFGST  240
TSEGGSYSKD QAQKQQYHIK QEMDQVILQG HILADQMQSQ SCMIKNHVAP LHNGLEEVKQ  300
LSFTSYLFPD AEENKTTHYQ KEMCSYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.19e-72MYB family protein