PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000234.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 170aa MW: 19227.5 Da PI: 9.7918

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000234.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.7	1.1e-40	58	135	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+++l+eak+yhrrh+vCe h+ka++v+v+g +qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ Cse_sc000234.1_g020.1 58 CCQAEKCTSNLAEAKQYHRRHRVCESHAKAQAVVVAGNHQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNSM 135 6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MESNKDFSKE NLSMTKKELL NDRGDGEDGV GGGSSKWDVK KKKAGPNGSG STSVVARCCQ 60 AEKCTSNLAE AKQYHRRHRV CESHAKAQAV VVAGNHQRFC QQCSRFHELS EFDEAKRSCR 120 RRLAGHNERR RKNSMEYKGT GKELVCVQTE DNRGRFQLAI QENSTYLQTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	8e-44	SBP family protein