PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000247.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-X1
Protein Properties Length: 148aa    MW: 16739.5 Da    PI: 7.942
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000247.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X119.61.9e-065370320
               zf-NF-X1  3 kHkCqklCHeGpCppCpq 20
                           kH+C+k CHeG+C++Cp+
  Cse_sc000247.1_g050.1 53 KHSCSKGCHEGECGKCPL 70
                           8***************95 PP
2zf-NF-X118.35.1e-0699118119
               zf-NF-X1   1 CGkHkCqklCHeGpCpp.Cp 19 
                            CG+H+C + CH+G C + C+
  Cse_sc000247.1_g050.1  99 CGIHRCPERCHRGTCVEmCR 118
                            ***************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
LFDCKVHCCD EVSHEGKCPP CRAKEVYTCQ CGKVKEEIDC CERVFRCEIE GVKHSCSKGC  60
HEGECGKCPL QGRRRTCPCG KRVYEGMACD GTCDTKLECG IHRCPERCHR GTCVEMCRIV  120
VWKSCKCVSI CDKKLRCNNH ESPSPCHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.14e-48NF-X1 family protein