PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000279.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 463aa    MW: 52700.1 Da    PI: 4.3803
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000279.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.72e-31271511128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Pt++el+v+yL++k+e++kl+    i+e  iy+++P++L +k+ + e++wyf ++r++  ++g+r++r+tk +g+Wk+  
  Cse_sc000279.1_g100.1  27 LLPGYRFCPTEQELIVNYLQPKLESRKLPP-ARIHEKFIYDYNPEELARKYLSAEDKWYFMTPRERVCPNGDRPKRTTKeNGFWKTGN 113
                            579************************999.66**************977778899********************66559****999 PP

                    NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + ev++ +++  g k+ L+fy+   +k +kt W+m ey+ 
  Cse_sc000279.1_g100.1 114 AKVEVCDVTQRRLGYKRNLAFYD---EKKRKTAWLMTEYTT 151
                            999****9**************4...44468********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MYPSIGMDSQ ISANTNHQSN RDYVDDLLPG YRFCPTEQEL IVNYLQPKLE SRKLPPARIH  60
EKFIYDYNPE ELARKYLSAE DKWYFMTPRE RVCPNGDRPK RTTKENGFWK TGNAKVEVCD  120
VTQRRLGYKR NLAFYDEKKR KTAWLMTEYT TTDPNLPVGN GTKLNNFVLC KIYKKKKKGD  180
RNMANEDEGN DEQNLSNDEP SPRRRRLNPG SNLSNEPQHV WIQEANHHLV APLQPANCYQ  240
QEANNIDTEG SLTALTGSAQ PFTAQTLSAN QDIGSNLDAM TSQTRINSSH YPITNNSKLK  300
HVNPHAMTGR EMAQSLCGSL ACDDQQNQSI LIALDEFLNG ASSSTEMEAE QLPDYMIDTI  360
QSSVTSTNGP PDSTADQVPQ PDEDFSELDL TDEFHQLFNF SPDDQVPEPA NNDTTTPLSD  420
EDFFNCSRAY EFPQLENYEA ILDEDLSDFT IMEMMSFEDN ELT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138178KKRKTAWLMTEYTTTDPNLPVGNGTKLNNFVLCKIYKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.15e-31NAC family protein