PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000308.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 194aa    MW: 21128.7 Da    PI: 9.755
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000308.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-182071156
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           ++y+GVr ++ +gr++AeI+dps+   ++r +lg+f+tae+Aa a++ a+++l+g+
  Cse_sc000308.1_g110.1 20 PHYRGVRKRP-SGRYAAEIKDPSK---TTRTWLGTFDTAEQAALAYDSAARQLRGN 71
                           68********.7*********964...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MSSRSKHVKK TEAANGSVEP HYRGVRKRPS GRYAAEIKDP SKTTRTWLGT FDTAEQAALA  60
YDSAARQLRG NKANTNFTNP VFIYHPAAAL PPEALELRFS SYFGGHAAAG PMFMYHHAAP  120
LPPEALELRL SSYSFGGQAP HGPLFPYHPG VTKNGIHNKV DMSYETSVGG SSSSGYSECS  180
KSKKLELDLN FPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.18e-28ERF family protein