PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000314.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 100aa    MW: 11432.8 Da    PI: 9.8468
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000314.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-071558344
                           SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                           +WT    +++ +a + + ++   +W+ Iar +g g++  ++k ++
  Cse_sc000314.1_g020.1 15 SWTSRQNKQFEEALAYYNKDtpdRWHNIARAVG-GKSVDEVKRHY 58
                           7*****************99*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MASSSMTSSR SSGSSWTSRQ NKQFEEALAY YNKDTPDRWH NIARAVGGKS VDEVKRHYEI  60
LVRDIMQIES DQVPLPIYRD IGSNGRGFAN EQRLLKNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.28e-34MYB_related family protein