PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000324.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 334aa    MW: 37632.2 Da    PI: 6.795
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000324.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-172269148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg W++eEde+l+++++ +G g W+++++  g+ R++k+c++rw +yl
  Cse_sc000324.1_g080.1 22 RGLWSPEEDEKLINYITSHGHGFWSSVPKLAGLQRCGKSCRLRWINYL 69
                           788*******************************************97 PP
2Myb_DNA-binding507.1e-1675117145
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                            rg+++ +E  l+vd+++ lG++ W+ Iar+++ gRt++++k++w+
  Cse_sc000324.1_g080.1  75 RGSFSSQEASLIVDLHQILGNR-WAQIARHLP-GRTDNEVKNFWN 117
                            899*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
LTKKEMGHGG GHTCCSKQKV KRGLWSPEED EKLINYITSH GHGFWSSVPK LAGLQRCGKS  60
CRLRWINYLH PDLKRGSFSS QEASLIVDLH QILGNRWAQI ARHLPGRTDN EVKNFWNSSI  120
KKKLLARSHL SSHHLITTFP NDKTTDIHVQ LGGDHQYYDG LFDASPIVIS PYQPHIIHDQ  180
DHHVHEPPRA ISQPHVINLD KCFDVDPTPD LPPLPQSFIV NSSSMFDNQF PTMEFLKSYD  240
HSILNPEDYD LIFGQNSDHN PTIIPFKLGD QTNNIELTTN IISQAINSHD LNPSTSSQTD  300
YLETFVPNFP SSSSSPSSSL VLPEFVVSKV SSIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.27e-69MYB family protein