PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000334.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 248aa    MW: 27730.5 Da    PI: 5.2448
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000334.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20103153255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  Cse_sc000334.1_g060.1 103 KYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFDTAVEAAKAYDRAAFKLRG 153
                            8********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MASPDESSAI DLIRQHLLID DQSFFQTYSL DETDFLFPEL SPLSPSYSSS SSNSCRNSST  60
NIFNERKPSL NISIPFPPPV VETTAVETRM MEPTAVEVEE RRKYRGVRQR PWGKFAAEIR  120
DPNKKGTRVW LGTFDTAVEA AKAYDRAAFK LRGSKAILNF PLEVENLNMA LEMPVSKSKS  180
TGRKRAGKAV DVEERENKKV MKTELKTEVN ADVTGPLTPS SWMAVWDCGE GDGIFEVPPL  240
SPYPCMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61600.13e-53ERF family protein