PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000334.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 242aa    MW: 26416 Da    PI: 9.0677
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000334.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97e-20122172255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a++ a+ +++g
  Cse_sc000334.1_g090.1 122 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAATAYDIAAYRMRG 172
                            8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MMQMTSFGLE PFPVFCRSAS FSSLVPCLTE KWGDLPLKVD DSEDMVIYGI LRDAVSVGWT  60
PFNFSVKSEP TEIKTEPIDI TDILAKSTVT STLVEPKVEK VVLSSASVSA STSVAAPPKG  120
KHYRGVRQRP WGKFAAEIRD PAKNGARVWL GTYETAEEAA TAYDIAAYRM RGSKALLNFP  180
HRIGLNEPEP VRVTSKRRSP EPSSSVSSAS SSKRRNTRVS LAEVVEPEVQ SRSSNMSEAV  240
SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-51ERF family protein