PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000339.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 109aa    MW: 12050 Da    PI: 8.9987
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000339.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.68.1e-077089525
                           --SGGGGTS--TTTTT-SS-S CS
                zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                           +C  fa+ G+C++G+ C++ H
  Cse_sc000339.1_g050.1 70 PCVLFAK-GHCRFGEACRYLH 89
                           789999*.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MFALEGLPNT YDVISTVIAS REPFPDLKTM RMKSKVQDSL VDATSVSPMV LLANNTPRRP  60
SNPLEKLNKP CVLFAKGHCR FGEACRYLHN GVHCKSTLLP RSSGSVDMD