PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000364.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 231aa    MW: 26976.7 Da    PI: 4.4738
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000364.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.81.1e-283390359
                           -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                           D ++WrKYGqK++kgs++pr+YY+C+++ +C++kk+ve +++d ++++itY+++Hnh+
  Cse_sc000364.1_g050.1 33 DSWSWRKYGQKPIKGSPHPRGYYKCSTSkSCTAKKQVEICRTDSSMLIITYTSTHNHP 90
                           99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MQGRKVGEKI VVKVKLEENE GKKKSDQNHP SCDSWSWRKY GQKPIKGSPH PRGYYKCSTS  60
KSCTAKKQVE ICRTDSSMLI ITYTSTHNHP NPANNKQTKN DSKSEISTTP EPDQESEEEK  120
PVEPDQEYEE EKPVEPDQEY EEEKPAVVTL ENDDFRYIQT PEEETHLTVN LENTYFYEEP  180
LMYPDLMNFS SLKTEENDFY DELEELPMSS STFKSFMRSN FFEERVLVQP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.13e-27WRKY family protein