PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000370.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 682aa MW: 79189.1 Da PI: 8.8489

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000370.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.7	2.9e-16	19	120	8	90
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkekdgkw 76 k++GF+vrk ++k ++ + ++f Cs+eg++e ++ +ek++r+ + ++gC ak+k++k + + + Cse_sc000370.1_g060.1 19 KRAGFDVRKGGHYKPNKGEDLNLKWFLCSREGTNEGKEVVddsknvvsehsditmdenvKEKKKRNCGSFKCGCLAKIKIRKIEGNLY 106 799****************************998876688999********99999999999**************** PP FAR1 77 evtkleleHnHela 90 e++++++ HnH+l+ Cse_sc000370.1_g060.1 107 EIYTFVEGHNHPLV 120 **********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MVVSLFLLIK RLISINISKR AGFDVRKGGH YKPNKGEDLN LKWFLCSREG TNEGKEVVDD 60 SKNVVSEHSD ITMDENVKEK KKRNCGSFKC GCLAKIKIRK IEGNLYEIYT FVEGHNHPLV 120 AEKDMIFMKS SRDLTYTKQH FLFQASNADF GPSTGFKLLK QKCGGFDRVG ATVLDYKNQK 180 KKINLFIGDL DAQMAVEKLL SKTLHTPGFY VNYKTGDDGK LVDLFWADEQ AIKDYAIFGD 240 IISFDATFRS NKYKMVFVPF TGINHHNRCI TFASGLLSDE TVGAYKWLLD EFKNAFGKDP 300 NVVITNQDPS MKIAIPECFP NTRHRLCMWH IMQKLTTKVG TVICSKTDFK RRICDIVWTD 360 QILLVDFELD DNKWLKDMFE MRERWIPGYL RDEPMAGLIR TNSRSESENH FFGKWTSPHL 420 TLVEFLSHYD MAIEYQRYIE RKNDHDSRYR KPVLKTDLQL EKEASTFYTK TVFFIVQDEI 480 YASYSHCMSV NILQIDDAER YSIRDMQADN KIRHDSNFVV DFCKSEMEIK CSCKHYESYG 540 LLCRHTFYVL KMNNIKEFPR KYLNKRWLKN AKPFNYVVTK VVAESESSLP IDRLVHNMDK 600 LKIFKDQMEE LLAKAKIDVP VVPKLILKDV LGSMLGVKEP KSHNIRNLDE SSNKGTGRTA 660 SSLKENQENS EADKNWSQKF QV

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MVVSLFLLIK RLISINISKR AGFDVRKGGH YKPNKGEDLN LKWFLCSREG TNEGKEVVDD  60
SKNVVSEHSD ITMDENVKEK KKRNCGSFKC GCLAKIKIRK IEGNLYEIYT FVEGHNHPLV  120
AEKDMIFMKS SRDLTYTKQH FLFQASNADF GPSTGFKLLK QKCGGFDRVG ATVLDYKNQK  180
KKINLFIGDL DAQMAVEKLL SKTLHTPGFY VNYKTGDDGK LVDLFWADEQ AIKDYAIFGD  240
IISFDATFRS NKYKMVFVPF TGINHHNRCI TFASGLLSDE TVGAYKWLLD EFKNAFGKDP  300
NVVITNQDPS MKIAIPECFP NTRHRLCMWH IMQKLTTKVG TVICSKTDFK RRICDIVWTD  360
QILLVDFELD DNKWLKDMFE MRERWIPGYL RDEPMAGLIR TNSRSESENH FFGKWTSPHL  420
TLVEFLSHYD MAIEYQRYIE RKNDHDSRYR KPVLKTDLQL EKEASTFYTK TVFFIVQDEI  480
YASYSHCMSV NILQIDDAER YSIRDMQADN KIRHDSNFVV DFCKSEMEIK CSCKHYESYG  540
LLCRHTFYVL KMNNIKEFPR KYLNKRWLKN AKPFNYVVTK VVAESESSLP IDRLVHNMDK  600
LKIFKDQMEE LLAKAKIDVP VVPKLILKDV LGSMLGVKEP KSHNIRNLDE SSNKGTGRTA  660
SSLKENQENS EADKNWSQKF QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-80	FAR1 family protein