PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000374.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 554aa MW: 62835.8 Da PI: 6.007

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000374.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.7	4.2e-31	160	213	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ ve LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Cse_sc000374.1_g030.1 160 PRMRWTTTLHARFVHSVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 213 9****************************************************7 PP
2	Myb_DNA-binding	42.6	1.4e-13	161	212	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+ v++lGg+ t+k++ + m k +tl ++ks++q+y+ Cse_sc000374.1_g030.1 161 RMRWTTTLHARFVHSVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 212 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MELFQAQPDL SLQISLPNTE PTSKTWTTST PSDQDHHDPN LGYFLKRAMN TQHHHTITSI 60 TRHEPEPGHS FGLKSSHLTH SINLDLTNIT NSNHNHGLKL DLGFLKPIIG VPVFDNYHDI 120 NSHNKHQSLL DSCSMVHAHN VAQTRFLSSR FSTKRNMRAP RMRWTTTLHA RFVHSVELLG 180 GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTIKTTDRA PSSLGQSEGL ENGSSGDVLG 240 DILLDIQNLK RTDSSVEHGG RSKVHREKDN PYGLWSNSSS RQAWLHGKHN DSQVNIPSLK 300 KEMNSKGINY ERLSEVNSSK PYTMNPNLEF TLGRPQEIET LTLLKGNELI FGNCNGALYK 360 EQEKDEYIFA KGTQQLKRRH SDGVFVEDTP IYKVPENNLQ FEQIVFPNGK VHNKAYYRHK 420 MLLAEIEEKG KALTADENDF MVDMDEEGEQ LETNMVFMAS LEKVDVYEVQ DEDSTPSYDT 480 DAKEDDQFIN QIHSSDACDI NDLDELIHGN ILTSNKINEI NTCSLTSTSD DLQLSTTSVE 540 CNHESKSQDQ HDML

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MELFQAQPDL SLQISLPNTE PTSKTWTTST PSDQDHHDPN LGYFLKRAMN TQHHHTITSI  60
TRHEPEPGHS FGLKSSHLTH SINLDLTNIT NSNHNHGLKL DLGFLKPIIG VPVFDNYHDI  120
NSHNKHQSLL DSCSMVHAHN VAQTRFLSSR FSTKRNMRAP RMRWTTTLHA RFVHSVELLG  180
GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTIKTTDRA PSSLGQSEGL ENGSSGDVLG  240
DILLDIQNLK RTDSSVEHGG RSKVHREKDN PYGLWSNSSS RQAWLHGKHN DSQVNIPSLK  300
KEMNSKGINY ERLSEVNSSK PYTMNPNLEF TLGRPQEIET LTLLKGNELI FGNCNGALYK  360
EQEKDEYIFA KGTQQLKRRH SDGVFVEDTP IYKVPENNLQ FEQIVFPNGK VHNKAYYRHK  420
MLLAEIEEKG KALTADENDF MVDMDEEGEQ LETNMVFMAS LEKVDVYEVQ DEDSTPSYDT  480
DAKEDDQFIN QIHSSDACDI NDLDELIHGN ILTSNKINEI NTCSLTSTSD DLQLSTTSVE  540
CNHESKSQDQ HDML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-57	G2-like family protein