PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000380.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 317aa    MW: 36124.4 Da    PI: 6.5331
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000380.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.42.7e-53161411128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrF Ptdeel+v+yL++kv+g++++l ++i +vd+yk++Pw+Lp+k+  +ekewyfFs+rd+ky++g+r+nr+++sgyWkatg+
  Cse_sc000380.1_g070.1  16 LPPGFRFYPTDEELMVQYLCRKVAGNDFPL-QIIGDVDLYKFDPWELPSKAMFGEKEWYFFSPRDRKYPNGTRPNRVASSGYWKATGT 102
                            79****************************.89***************8777899********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk +ls +g++vg+kk Lvfy g+ap+g+kt+W+mheyrl
  Cse_sc000380.1_g070.1 103 DKVILS-EGRKVGIKKALVFYVGKAPRGSKTNWIMHEYRL 141
                            *****9.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MIAPVPVTDP MKQLSLPPGF RFYPTDEELM VQYLCRKVAG NDFPLQIIGD VDLYKFDPWE  60
LPSKAMFGEK EWYFFSPRDR KYPNGTRPNR VASSGYWKAT GTDKVILSEG RKVGIKKALV  120
FYVGKAPRGS KTNWIMHEYR LSEPPKRSHS LRLDDWVLCR IYKKNSSAEK TFSERPKTEP  180
SHNSSSSSSS HIDDVLDSFP DTIPAMDDKY LSFQNNKATF TEEEDQKVDM TTNYDWASIA  240
AFGLQDPTSN NANGSCMDPT FDMQMKFGKS PNDEVDNGIR SQRMENSGYL FSQSFVNSND  300
PFAIRYPTQS SGSGYRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.11e-108NAC family protein