PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000388.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 208aa MW: 23133.5 Da PI: 7.9988

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000388.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.6e-05	40	62	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Cse_sc000388.1_g050.1 40 YTCTFCRREFRSAQALGGHMNVH 62 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MWNPNLVTAG GQEEDDSWEV KAFAEDTGNI MGTTWPPRSY TCTFCRREFR SAQALGGHMN 60 VHRRDRARLH QAQPNFKNPN LPSPSSSTLL INPTQELVAN GGLCLLYSLP NPNTIFNHSS 120 LGNEIGNHSS FLSITPHPST ENFMNFQASF GTRSFKSSLS SFSNTETSTS TNFQRNQKDS 180 LDNKRKKTDS TIEGIDLELR LGCNSRAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	1e-34	C2H2 family protein