PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000404.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 127aa    MW: 15057.9 Da    PI: 5.2741
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000404.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.34.6e-17291071289
                   FAR1  12 Fsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                            Fsv  +++ +  +  +e ++r++vC+k+g ++ ++k+  ++  ++r  tr+gC a+++v+++ +g w+v++++ eHnH+l
  Cse_sc000404.1_g010.1  29 FSVHDEEEMEPtNVFDESIRRELVCNKQGLKNMNDKRrLTDDVKRRCITRIGCMAMIQVTLK-QGLWVVDRFKAEHNHNL 107
                            6666555444335678899**********999888875788999******************.9**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MDNFVNEAQL LSDDEEEQIL TRNFENDAFS VHDEEEMEPT NVFDESIRRE LVCNKQGLKN  60
MNDKRRLTDD VKRRCITRIG CMAMIQVTLK QGLWVVDRFK AEHNHNLDLP SQVLKQRSHN  120
IFHRSNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-16FAR1 family protein