PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000431.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 406aa MW: 46694.6 Da PI: 4.8484

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000431.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.2	2e-36	38	129	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+y+i++d+++++++sws+ng+sfvv+d++ f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ + weF+++ F +g Cse_sc000431.1_g060.1 38 FLNKIYDIVDDQSVDHIVSWSRNGQSFVVWDPHAFSTNLLPRYFKHNNFSSFVRQLNTYGFRKIDPDI---------WEFANEGFIRG 116 9*************************************************************9876.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 k+++l++ikr+k+ Cse_sc000431.1_g060.1 117 KRSNLKNIKRRKT 129 *********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MNPYYPDVKK EYHPSSVLSG VDLPQPMEGL HEAGPPPFLN KIYDIVDDQS VDHIVSWSRN 60 GQSFVVWDPH AFSTNLLPRY FKHNNFSSFV RQLNTYGFRK IDPDIWEFAN EGFIRGKRSN 120 LKNIKRRKTL SQPPVPQQVV SPCVEVGKYG IDGEVKRLKR DKQILMMELV KLRQQQQNTR 180 AHLQAMELRI QGTEKKQQKM MSFLAKAMQN PNFIQKLVHH GKRNDLEDVI MNKRRRFIDY 240 GDGSTLVKDE PQEWDDPNPS GFEMSELDEL ALEMQGFGRA KSDKEEVFND PDGLECGDRE 300 LDEEFWEELF NEQFGVTGSE GTLDHDDVDE DKKFVGICML ITSSHISEDT TVEDSMAAIW 360 KSANLDDNVV GPISCGGNLG YMLPSNTFIR FTLQDIPNVN WDHMDL

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MNPYYPDVKK EYHPSSVLSG VDLPQPMEGL HEAGPPPFLN KIYDIVDDQS VDHIVSWSRN  60
GQSFVVWDPH AFSTNLLPRY FKHNNFSSFV RQLNTYGFRK IDPDIWEFAN EGFIRGKRSN  120
LKNIKRRKTL SQPPVPQQVV SPCVEVGKYG IDGEVKRLKR DKQILMMELV KLRQQQQNTR  180
AHLQAMELRI QGTEKKQQKM MSFLAKAMQN PNFIQKLVHH GKRNDLEDVI MNKRRRFIDY  240
GDGSTLVKDE PQEWDDPNPS GFEMSELDEL ALEMQGFGRA KSDKEEVFND PDGLECGDRE  300
LDEEFWEELF NEQFGVTGSE GTLDHDDVDE DKKFVGICML ITSSHISEDT TVEDSMAAIW  360
KSANLDDNVV GPISCGGNLG YMLPSNTFIR FTLQDIPNVN WDHMDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	LKNIKRR
2	156	199	KRLKRDKQILMMELVKLRQQQQNTRAHLQAMELRIQGTEKKQQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-110	HSF family protein