PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000458.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 188aa    MW: 19950.8 Da    PI: 5.6772
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000458.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17e-163483155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                           + y+G+r  ++ g+Wv+eIr+p     +  +r++lg++ t+e+Aa+a++ a+++l+g
  Cse_sc000458.1_g110.1 34 PVYHGIR--SRAGKWVSEIREP-----NkpTRIWLGTYPTPEMAAAAYDVAALALKG 83
                           5799995..779*********8.....448************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MANRRRRNTS ASQQPESDNN NPRVATGSSS TRHPVYHGIR SRAGKWVSEI REPNKPTRIW  60
LGTYPTPEMA AAAYDVAALA LKGTYAILNF PESISNNTLP ECPTADDIRA AAAGAAAARD  120
PTNQSGAGSS SGTGTNLYGQ YIDHEDIFGN PNMLSDMAEG MLISPPRDNN NSPPGGGDNS  180
GGGNLWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-29ERF family protein